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- Author: Adam Buchbinder <adam.buchbinder@gmail.com>
- Description: Adding new magics for PDB files (Closes: #480829).
- diff -Naurp file.orig/magic/Magdir/scientific file/magic/Magdir/scientific
- --- file.orig/magic/Magdir/scientific 2010-07-11 00:17:48.700953291 +0200
- +++ file/magic/Magdir/scientific 2010-07-13 18:10:28.461677038 +0200
- @@ -71,3 +71,29 @@
- 0 string \060\000\040\000\110\000\105\000\101\000\104\000 GEDCOM data
- 0 string \376\377\000\060\000\040\000\110\000\105\000\101\000\104 GEDCOM data
- 0 string \377\376\060\000\040\000\110\000\105\000\101\000\104\000 GEDCOM data
- +
- +# PDB: Protein Data Bank files
- +# Adam Buchbinder <adam.buchbinder@gmail.com>
- +#
- +# http://www.wwpdb.org/documentation/format32/sect2.html
- +# http://www.ch.ic.ac.uk/chemime/
- +#
- +# The PDB file format is fixed-field, 80 columns. From the spec:
- +#
- +# COLS DATA
- +# 1 - 6 "HEADER"
- +# 11 - 50 String(40)
- +# 51 - 59 Date
- +# 63 - 66 IDcode
- +#
- +# Thus, positions 7-10, 60-62 and 67-80 are spaces. The Date must be in the
- +# format DD-MMM-YY, e.g., 01-JAN-70, and the IDcode consists of numbers and
- +# uppercase letters. However, examples have been seen without the date string,
- +# e.g., the example on the chemime site.
- +0 string HEADER\ \ \ \
- +>&0 regex/1 \^.{40}
- +>>&0 regex/1 [0-9]{2}-[A-Z]{3}-[0-9]{2}\ {3}
- +>>>&0 regex/1s [A-Z0-9]{4}.{14}$
- +>>>>&0 regex/1 [A-Z0-9]{4} Protein Data Bank data, ID Code %s
- +!:mime chemical/x-pdb
- +>>>>0 regex/1 [0-9]{2}-[A-Z]{3}-[0-9]{2} \b, %s
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